Single-nucleus eQTL atlas

Developing Human Brain // eQTL Browser

134 samples · 7 major cell types · 19 subpopulations
3,121 unique eGenes · Second trimester cortex

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Drop eQTL TSV files here

Accepts *_cis_eQTL_perm.tsv.gz · multiple files · processed entirely in-browser

Fetches data files directly from the GitHub Pages deployment.
BETA: Only Glu-UL searchable until publication. Deselect all other cell types then hit

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      Cell type
      
    
    
      Search gene symbol or Ensembl ID
      
      
    
    
      SNP / rsID
      
    
    
       
      
    
  

  
    
      Chromosome
      
    
    
      Max q-value
      
    
    
      Effect direction
      
    
    
      Rows per page
      
    
  

  
  
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          Gene
          Ensembl ID
          Chr
          Position
          SNP
          Ref
          Alt
          AF
          Slope
          SE
          p (nominal)
          p (beta)
          q-value
          FDR 5%